Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
WNT3AP56704 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3AP56704 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.52■□□□□ 0.23
WNT3AP56704 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
WNT3AP56704 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3AP56704 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.52■□□□□ 0.23
WNT3AP56704 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.52■□□□□ 0.23
WNT3AP56704 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3AP56704 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3AP56704 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
WNT3AP56704 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 AC024909.3-201ENST00000611513 2257 ntBASIC16.51■□□□□ 0.23
WNT3AP56704 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 TIMM8BP1-201ENST00000452384 211 ntBASIC16.51■□□□□ 0.23
WNT3AP56704 AC105233.2-201ENST00000523697 349 ntBASIC16.51■□□□□ 0.23
WNT3AP56704 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.51■□□□□ 0.23
WNT3AP56704 AF228730.5-201ENST00000530288 346 ntBASIC16.51■□□□□ 0.23
WNT3AP56704 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.51■□□□□ 0.23
WNT3AP56704 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 AC008741.2-201ENST00000612792 3115 ntBASIC16.51■□□□□ 0.23
WNT3AP56704 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 ELL2P1-201ENST00000413990 1906 ntBASIC16.51■□□□□ 0.23
WNT3AP56704 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
WNT3AP56704 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3AP56704 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3AP56704 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3AP56704 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
WNT3AP56704 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
WNT3AP56704 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.5■□□□□ 0.23
WNT3AP56704 BX842568.4-201ENST00000421222 227 ntBASIC16.5■□□□□ 0.23
WNT3AP56704 SPCS2P4-201ENST00000436160 681 ntBASIC16.5■□□□□ 0.23
WNT3AP56704 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.5■□□□□ 0.23
WNT3AP56704 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3AP56704 AC079140.1-201ENST00000508039 487 ntBASIC16.5■□□□□ 0.23
WNT3AP56704 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.5■□□□□ 0.23
WNT3AP56704 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 AL603832.2-201ENST00000566195 2125 ntBASIC16.5■□□□□ 0.23
WNT3AP56704 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3AP56704 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3AP56704 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3AP56704 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3AP56704 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3AP56704 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3AP56704 FOXO1B-201ENST00000504678 1527 ntBASIC16.5■□□□□ 0.23
WNT3AP56704 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.5■□□□□ 0.23
WNT3AP56704 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT3AP56704 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT3AP56704 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT3AP56704 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
WNT3AP56704 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms