Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A9P48067 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC6A9P48067 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A9P48067 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 AC012569.1-201ENST00000591191 1524 ntBASIC14.54□□□□□ -0.08
SLC6A9P48067 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A9P48067 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC6A9P48067 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SLC6A9P48067 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC6A9P48067 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A9P48067 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A9P48067 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 AC007950.2-201ENST00000615045 2347 ntBASIC14.53□□□□□ -0.08
SLC6A9P48067 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SLC6A9P48067 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A9P48067 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.53□□□□□ -0.08
SLC6A9P48067 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 AC098831.1-202ENST00000438821 336 ntBASIC14.53□□□□□ -0.08
SLC6A9P48067 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
SLC6A9P48067 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC6A9P48067 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SLC6A9P48067 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC6A9P48067 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC6A9P48067 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC6A9P48067 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC6A9P48067 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC6A9P48067 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SLC6A9P48067 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A9P48067 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC6A9P48067 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SLC6A9P48067 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC6A9P48067 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms