Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.5■□□□□ 0.23
XPAP23025 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.5■□□□□ 0.23
XPAP23025 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.5■□□□□ 0.23
XPAP23025 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
XPAP23025 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
XPAP23025 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
XPAP23025 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
XPAP23025 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
XPAP23025 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.49■□□□□ 0.23
XPAP23025 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.49■□□□□ 0.23
XPAP23025 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.49■□□□□ 0.23
XPAP23025 AC069262.1-201ENST00000539058 672 ntBASIC16.49■□□□□ 0.23
XPAP23025 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 AL512356.2-201ENST00000546955 174 ntBASIC16.49■□□□□ 0.23
XPAP23025 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 AC003101.2-201ENST00000612557 442 ntBASIC16.49■□□□□ 0.23
XPAP23025 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
XPAP23025 AC079328.2-201ENST00000561241 3354 ntBASIC16.49■□□□□ 0.23
XPAP23025 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XPAP23025 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
XPAP23025 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 TUBB3P1-201ENST00000405796 1332 ntBASIC16.48■□□□□ 0.23
XPAP23025 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 AP3S2-216ENST00000617003 1561 ntBASIC16.48■□□□□ 0.23
XPAP23025 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.48■□□□□ 0.23
XPAP23025 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 SPDYE14P-201ENST00000442619 822 ntBASIC16.48■□□□□ 0.23
XPAP23025 AC093724.1-201ENST00000448659 1027 ntBASIC16.48■□□□□ 0.23
XPAP23025 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
XPAP23025 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.48■□□□□ 0.23
XPAP23025 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.48■□□□□ 0.23
XPAP23025 RARRES2P9-201ENST00000565168 469 ntBASIC16.48■□□□□ 0.23
XPAP23025 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XPAP23025 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
XPAP23025 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
XPAP23025 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms