Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN1P18031 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.27■□□□□ 0.35
PTPN1P18031 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN1P18031 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.27■□□□□ 0.35
PTPN1P18031 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN1P18031 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTPN1P18031 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN1P18031 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 MIR770-201ENST00000390219 98 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 TREML5P-201ENST00000421694 576 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 AC055876.3-201ENST00000431496 288 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 AC069120.2-201ENST00000524091 540 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.26■□□□□ 0.35
PTPN1P18031 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 BANF1P1-201ENST00000553684 263 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 AC005498.2-205ENST00000593218 784 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN1P18031 AC138649.4-201ENST00000612222 287 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PTPN1P18031 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN1P18031 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN1P18031 AL035456.1-201ENST00000456064 1369 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 FO538757.1-201ENST00000623083 1397 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN1P18031 AC046158.3-201ENST00000624947 2558 ntBASIC17.26■□□□□ 0.35
PTPN1P18031 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTPN1P18031 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PTPN1P18031 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN1P18031 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN1P18031 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN1P18031 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN1P18031 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN1P18031 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN1P18031 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PTPN1P18031 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN1P18031 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 HMGN1P19-201ENST00000436976 333 ntBASIC17.25■□□□□ 0.35
PTPN1P18031 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN1P18031 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN1P18031 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 AL390955.2-201ENST00000603032 514 ntBASIC17.25■□□□□ 0.35
PTPN1P18031 RN7SL828P-201ENST00000607615 303 ntBASIC17.25■□□□□ 0.35
PTPN1P18031 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTPN1P18031 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN1P18031 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN1P18031 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN1P18031 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PTPN1P18031 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN1P18031 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTPN1P18031 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PTPN1P18031 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 MTND6P24-201ENST00000440466 518 ntBASIC17.24■□□□□ 0.35
PTPN1P18031 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN1P18031 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 AC097493.3-201ENST00000509725 367 ntBASIC17.24■□□□□ 0.35
PTPN1P18031 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN1P18031 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN1P18031 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN1P18031 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.24■□□□□ 0.35
PTPN1P18031 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PTPN1P18031 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN1P18031 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms