Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNKO75909 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNKO75909 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.22□□□□□ -0.13
CCNKO75909 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNKO75909 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.22□□□□□ -0.13
CCNKO75909 CD177P1-201ENST00000606252 935 ntBASIC14.22□□□□□ -0.13
CCNKO75909 DGCR10-201ENST00000609839 495 ntBASIC14.22□□□□□ -0.13
CCNKO75909 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCNKO75909 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCNKO75909 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNKO75909 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.22□□□□□ -0.13
CCNKO75909 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.22□□□□□ -0.13
CCNKO75909 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCNKO75909 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCNKO75909 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNKO75909 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNKO75909 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNKO75909 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNKO75909 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.21□□□□□ -0.13
CCNKO75909 RPPH1-201ENST00000516869 333 ntBASIC14.21□□□□□ -0.13
CCNKO75909 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.21□□□□□ -0.13
CCNKO75909 AP003041.3-201ENST00000527151 707 ntBASIC14.21□□□□□ -0.13
CCNKO75909 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CCNKO75909 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.21□□□□□ -0.13
CCNKO75909 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CCNKO75909 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.21□□□□□ -0.13
CCNKO75909 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 LINC01230-201ENST00000625222 3017 ntBASIC14.21□□□□□ -0.13
CCNKO75909 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCNKO75909 AC091951.1-201ENST00000512854 2465 ntBASIC14.21□□□□□ -0.13
CCNKO75909 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCNKO75909 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.21□□□□□ -0.14
CCNKO75909 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CCNKO75909 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.21□□□□□ -0.14
CCNKO75909 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCNKO75909 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.2□□□□□ -0.14
CCNKO75909 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
CCNKO75909 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.2□□□□□ -0.14
CCNKO75909 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.2□□□□□ -0.14
CCNKO75909 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCNKO75909 CR383656.2-201ENST00000548656 2254 ntBASIC14.2□□□□□ -0.14
CCNKO75909 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCNKO75909 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.2□□□□□ -0.14
CCNKO75909 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms