Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 HLA-H-201ENST00000383620 1096 ntBASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 RARRES2P9-201ENST00000565168 469 ntBASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 AC140878.1-201ENST00000565277 250 ntBASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 AP3S2-216ENST00000617003 1561 ntBASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP6V0A4Q9HBG4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 MIR6080-201ENST00000617359 66 ntBASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP6V0A4Q9HBG4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 FAM220BP-201ENST00000377689 816 ntBASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 IGHV3-42-201ENST00000520410 361 ntBASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP6V0A4Q9HBG4 FO538757.1-201ENST00000623083 1397 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms