Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.32■□□□□ 0.04
CDCP1Q9H5V8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDCP1Q9H5V8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.32■□□□□ 0.04
CDCP1Q9H5V8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDCP1Q9H5V8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 AGGF1P2-201ENST00000426656 2106 ntBASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 MIR346-201ENST00000362234 95 ntBASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 AP001059.3-201ENST00000619053 235 ntBASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CDCP1Q9H5V8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AC026150.2-201ENST00000564693 1156 ntBASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AL136379.1-201ENST00000623471 2642 ntBASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AC084121.4-201ENST00000641598 221 ntBASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 AF228730.8-201ENST00000642140 221 ntBASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDCP1Q9H5V8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.29■□□□□ 0.04
CDCP1Q9H5V8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms