Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS11Q9H270 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VPS11Q9H270 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.52■□□□□ 0.24
VPS11Q9H270 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS11Q9H270 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 SCARNA2-201ENST00000458748 420 ntBASIC16.52■□□□□ 0.24
VPS11Q9H270 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS11Q9H270 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.52■□□□□ 0.24
VPS11Q9H270 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS11Q9H270 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.52■□□□□ 0.24
VPS11Q9H270 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VPS11Q9H270 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VPS11Q9H270 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS11Q9H270 AL353732.1-201ENST00000569618 1459 ntBASIC16.52■□□□□ 0.23
VPS11Q9H270 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
VPS11Q9H270 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS11Q9H270 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS11Q9H270 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS11Q9H270 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS11Q9H270 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VPS11Q9H270 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
VPS11Q9H270 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VPS11Q9H270 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 AC069224.1-201ENST00000566372 1715 ntBASIC16.51■□□□□ 0.23
VPS11Q9H270 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.51■□□□□ 0.23
VPS11Q9H270 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.51■□□□□ 0.23
VPS11Q9H270 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.51■□□□□ 0.23
VPS11Q9H270 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.51■□□□□ 0.23
VPS11Q9H270 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 AL805961.1-202ENST00000641562 540 ntBASIC16.51■□□□□ 0.23
VPS11Q9H270 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.51■□□□□ 0.23
VPS11Q9H270 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS11Q9H270 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS11Q9H270 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
VPS11Q9H270 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VPS11Q9H270 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms