Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AC104771.1-201ENST00000603335 964 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AC010653.2-201ENST00000623505 997 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 AL139011.1-202ENST00000642063 584 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AL049757.1-201ENST00000616842 1596 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AC069224.1-201ENST00000566372 1715 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 TMBIM7P-203ENST00000641617 1718 ntBASIC12.42□□□□□ -0.42
MRPL54Q6P161 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL54Q6P161 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL54Q6P161 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 KRT8P10-201ENST00000450021 1447 ntBASIC12.41□□□□□ -0.42
MRPL54Q6P161 ECEL1P2-202ENST00000465689 757 ntBASIC12.41□□□□□ -0.42
MRPL54Q6P161 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 DUX4L17-201ENST00000557360 1267 ntBASIC12.41□□□□□ -0.42
MRPL54Q6P161 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 FAM197Y4-202ENST00000622692 608 ntBASIC12.41□□□□□ -0.42
MRPL54Q6P161 AC073912.3-201ENST00000624414 853 ntBASIC12.41□□□□□ -0.42
MRPL54Q6P161 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL54Q6P161 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
MRPL54Q6P161 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 AC006277.1-201ENST00000624348 1610 ntBASIC12.4□□□□□ -0.42
MRPL54Q6P161 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
MRPL54Q6P161 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL54Q6P161 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms