Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC098859.1-201ENST00000502915 1238 ntBASIC17.23■□□□□ 0.35
USP46P62068 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.23■□□□□ 0.35
USP46P62068 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.23■□□□□ 0.35
USP46P62068 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.23■□□□□ 0.35
USP46P62068 AC011467.4-201ENST00000594891 528 ntBASIC17.23■□□□□ 0.35
USP46P62068 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.23■□□□□ 0.35
USP46P62068 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 GGT3P-204ENST00000453783 1664 ntBASIC17.23■□□□□ 0.35
USP46P62068 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USP46P62068 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP46P62068 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.22■□□□□ 0.35
USP46P62068 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
USP46P62068 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP46P62068 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.22■□□□□ 0.35
USP46P62068 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
USP46P62068 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
USP46P62068 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
USP46P62068 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 AC092580.3-201ENST00000430932 139 ntBASIC17.22■□□□□ 0.35
USP46P62068 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.22■□□□□ 0.35
USP46P62068 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 AC097493.3-201ENST00000509725 367 ntBASIC17.22■□□□□ 0.35
USP46P62068 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 LINC02084-201ENST00000606069 1096 ntBASIC17.22■□□□□ 0.35
USP46P62068 AL096865.1-201ENST00000606796 927 ntBASIC17.22■□□□□ 0.35
USP46P62068 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.22■□□□□ 0.35
USP46P62068 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP46P62068 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
USP46P62068 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.21■□□□□ 0.35
USP46P62068 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 PCGF3-213ENST00000620529 1899 ntBASIC17.21■□□□□ 0.35
USP46P62068 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
USP46P62068 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.21■□□□□ 0.35
USP46P62068 FAM8A3P-201ENST00000427218 844 ntBASIC17.21■□□□□ 0.35
USP46P62068 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.21■□□□□ 0.35
USP46P62068 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.21■□□□□ 0.35
USP46P62068 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.21■□□□□ 0.35
USP46P62068 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.21■□□□□ 0.35
USP46P62068 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.21■□□□□ 0.35
USP46P62068 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
USP46P62068 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.21■□□□□ 0.35
USP46P62068 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP46P62068 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
USP46P62068 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.21■□□□□ 0.34
USP46P62068 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
USP46P62068 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.2■□□□□ 0.34
USP46P62068 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP46P62068 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.2■□□□□ 0.34
USP46P62068 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms