Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLDN20P56880 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CLDN20P56880 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN20P56880 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN20P56880 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN20P56880 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.05■□□□□ 0
CLDN20P56880 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CLDN20P56880 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN20P56880 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.05■□□□□ 0
CLDN20P56880 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.05■□□□□ 0
CLDN20P56880 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN20P56880 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.05■□□□□ 0
CLDN20P56880 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN20P56880 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.05■□□□□ 0
CLDN20P56880 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN20P56880 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CLDN20P56880 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CLDN20P56880 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
CLDN20P56880 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.05■□□□□ -0
CLDN20P56880 AC211486.1-202ENST00000416371 468 ntBASIC15.05■□□□□ -0
CLDN20P56880 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.05■□□□□ -0
CLDN20P56880 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.05■□□□□ -0
CLDN20P56880 AC004967.1-201ENST00000453589 447 ntBASIC15.05■□□□□ -0
CLDN20P56880 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.05■□□□□ -0
CLDN20P56880 AC211476.1-201ENST00000503899 468 ntBASIC15.05■□□□□ -0
CLDN20P56880 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.05■□□□□ -0
CLDN20P56880 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.05■□□□□ -0
CLDN20P56880 AL031055.1-201ENST00000606362 631 ntBASIC15.05■□□□□ -0
CLDN20P56880 AC099522.2-201ENST00000607001 744 ntBASIC15.05■□□□□ -0
CLDN20P56880 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.05■□□□□ -0
CLDN20P56880 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.05■□□□□ -0
CLDN20P56880 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.05■□□□□ -0
CLDN20P56880 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.05■□□□□ -0
CLDN20P56880 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.05■□□□□ -0
CLDN20P56880 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CLDN20P56880 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CLDN20P56880 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CLDN20P56880 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.05■□□□□ -0
CLDN20P56880 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CLDN20P56880 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.05■□□□□ -0
CLDN20P56880 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN20P56880 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CLDN20P56880 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CLDN20P56880 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDN20P56880 DBET-201ENST00000630918 3363 ntBASIC15.04■□□□□ -0
CLDN20P56880 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.04■□□□□ -0
CLDN20P56880 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CLDN20P56880 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.04■□□□□ -0
CLDN20P56880 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLDN20P56880 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLDN20P56880 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDN20P56880 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.04■□□□□ -0
CLDN20P56880 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDN20P56880 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDN20P56880 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.04■□□□□ -0
CLDN20P56880 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CLDN20P56880 RPS8P6-201ENST00000426177 609 ntBASIC15.04■□□□□ -0
CLDN20P56880 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.04■□□□□ -0
CLDN20P56880 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.04■□□□□ -0
CLDN20P56880 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
CLDN20P56880 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.04■□□□□ -0
CLDN20P56880 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CLDN20P56880 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.04■□□□□ -0
CLDN20P56880 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.04■□□□□ -0
CLDN20P56880 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN20P56880 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms