Protein–RNA interactions for Protein: P32302

CXCR5, C-X-C chemokine receptor type 5, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR5P32302 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCR5P32302 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCR5P32302 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CXCR5P32302 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCR5P32302 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCR5P32302 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCR5P32302 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.34■□□□□ 0.37
CXCR5P32302 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 FOSL1P1-201ENST00000511041 816 ntBASIC17.34■□□□□ 0.37
CXCR5P32302 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCR5P32302 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCR5P32302 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 SART3-203ENST00000546611 1184 ntBASIC17.34■□□□□ 0.37
CXCR5P32302 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 AL353732.1-201ENST00000569618 1459 ntBASIC17.34■□□□□ 0.37
CXCR5P32302 AC006504.4-201ENST00000592118 1568 ntBASIC17.34■□□□□ 0.37
CXCR5P32302 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CXCR5P32302 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCR5P32302 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCR5P32302 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.34■□□□□ 0.37
CXCR5P32302 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 AC005622.1-201ENST00000636801 1703 ntBASIC17.34■□□□□ 0.37
CXCR5P32302 AP000550.4-202ENST00000639755 178 ntBASIC17.34■□□□□ 0.37
CXCR5P32302 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CXCR5P32302 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCR5P32302 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.33■□□□□ 0.37
CXCR5P32302 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.33■□□□□ 0.37
CXCR5P32302 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.33■□□□□ 0.37
CXCR5P32302 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.33■□□□□ 0.37
CXCR5P32302 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.33■□□□□ 0.37
CXCR5P32302 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CXCR5P32302 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CXCR5P32302 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCR5P32302 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CXCR5P32302 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCR5P32302 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.33■□□□□ 0.36
CXCR5P32302 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.33■□□□□ 0.36
CXCR5P32302 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.33■□□□□ 0.36
CXCR5P32302 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.33■□□□□ 0.36
CXCR5P32302 AC087641.1-201ENST00000557561 1021 ntBASIC17.33■□□□□ 0.36
CXCR5P32302 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.33■□□□□ 0.36
CXCR5P32302 MTDHP4-201ENST00000600287 670 ntBASIC17.33■□□□□ 0.36
CXCR5P32302 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CXCR5P32302 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CXCR5P32302 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCR5P32302 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.33■□□□□ 0.36
CXCR5P32302 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXCR5P32302 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCR5P32302 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CXCR5P32302 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR5P32302 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCR5P32302 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CXCR5P32302 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.32■□□□□ 0.36
CXCR5P32302 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CXCR5P32302 SSR4P1-203ENST00000599569 2260 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms