Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX6O95503 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.41■□□□□ 0.22
CBX6O95503 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX6O95503 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CBX6O95503 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 RCN1P2-201ENST00000398357 915 ntBASIC16.41■□□□□ 0.22
CBX6O95503 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 FGFR3P6-201ENST00000457012 610 ntBASIC16.41■□□□□ 0.22
CBX6O95503 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX6O95503 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX6O95503 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.41■□□□□ 0.22
CBX6O95503 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX6O95503 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CBX6O95503 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CBX6O95503 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CBX6O95503 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX6O95503 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.41■□□□□ 0.22
CBX6O95503 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CBX6O95503 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CBX6O95503 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX6O95503 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CBX6O95503 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CBX6O95503 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CBX6O95503 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX6O95503 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX6O95503 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 RBM17P3-201ENST00000417687 1192 ntBASIC16.4■□□□□ 0.22
CBX6O95503 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX6O95503 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.4■□□□□ 0.22
CBX6O95503 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.4■□□□□ 0.22
CBX6O95503 DUX4L17-201ENST00000557360 1267 ntBASIC16.4■□□□□ 0.22
CBX6O95503 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 STK25P1-201ENST00000585406 838 ntBASIC16.4■□□□□ 0.22
CBX6O95503 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.4■□□□□ 0.22
CBX6O95503 MTDHP3-201ENST00000594186 672 ntBASIC16.4■□□□□ 0.22
CBX6O95503 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX6O95503 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.4■□□□□ 0.22
CBX6O95503 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CBX6O95503 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CBX6O95503 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBX6O95503 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CBX6O95503 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CBX6O95503 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CBX6O95503 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.39■□□□□ 0.21
CBX6O95503 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX6O95503 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CBX6O95503 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.39■□□□□ 0.21
CBX6O95503 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX6O95503 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX6O95503 PGAM5P1-201ENST00000518923 814 ntBASIC16.39■□□□□ 0.21
CBX6O95503 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX6O95503 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.39■□□□□ 0.21
CBX6O95503 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
CBX6O95503 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms