Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AL024508.2-201ENST00000607749 1894 ntBASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AC112693.3-201ENST00000624819 1983 ntBASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 DNM1P41-201ENST00000623634 3350 ntBASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AK3-203ENST00000447596 705 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AC126544.1-201ENST00000580842 1059 ntBASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 GGT3P-204ENST00000453783 1664 ntBASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 AC092127.1-201ENST00000567093 3455 ntBASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LINC01558Q9Y6Z2 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
LINC01558Q9Y6Z2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms