Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC023141.13-201ENST00000604991 943 ntBASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA11Q9Y5H2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 AC010507.1-201ENST00000633895 436 ntBASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 AC104109.2-201ENST00000602919 1418 ntBASIC15.94■□□□□ 0.14
PCDHGA11Q9Y5H2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 FER1L4-210ENST00000615531 5998 ntBASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA11Q9Y5H2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms