Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRCH1Q9Y2L9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 AC092647.4-201ENST00000457211 535 ntBASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 AC022616.7-201ENST00000525383 220 ntBASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 AC140113.3-201ENST00000605663 199 ntBASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 AC139887.4-201ENST00000607877 719 ntBASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRCH1Q9Y2L9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
LRCH1Q9Y2L9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 AC063952.2-201ENST00000498792 1227 ntBASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 KRT18P35-201ENST00000510488 1269 ntBASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 REXO1L8P-201ENST00000604378 1897 ntBASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 AL445228.2-201ENST00000605589 952 ntBASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRCH1Q9Y2L9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms