Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 PMS2P4-201ENST00000412466 1052 ntBASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AC107890.1-201ENST00000422478 521 ntBASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 BASP1P1-201ENST00000430708 665 ntBASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AC027307.2-201ENST00000591252 911 ntBASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AC008677.1-201ENST00000519230 1561 ntBASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AL645728.1-201ENST00000366221 2101 ntBASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AL118508.1-201ENST00000613502 2345 ntBASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 AC016027.1-202ENST00000607927 1699 ntBASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 SPDYE7P-202ENST00000420373 878 ntBASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 IGHV3-42-201ENST00000520410 361 ntBASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 MIR6080-201ENST00000617359 66 ntBASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 AC008267.7-201ENST00000624570 1194 ntBASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 LINC00895-201ENST00000629028 1637 ntBASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA1Q9UND3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AC063926.3-201ENST00000624734 5658 ntBASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms