Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKKSQ9NPJ1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 GGT4P-201ENST00000623672 1708 ntBASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 AC069262.1-201ENST00000539058 672 ntBASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 AC026150.2-201ENST00000564693 1156 ntBASIC15.52■□□□□ 0.08
MKKSQ9NPJ1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MKKSQ9NPJ1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 SPDYE14P-201ENST00000442619 822 ntBASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 CYMP-203ENST00000474680 1263 ntBASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 AC106028.4-201ENST00000614509 607 ntBASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 SPTSSB-204ENST00000617024 1292 ntBASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 Z92544.3-201ENST00000624747 417 ntBASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKKSQ9NPJ1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms