Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 LAGE3P1-201ENST00000425356 484 ntBASIC15.01□□□□□ -0.01
SNX18Q96RF0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 AC087163.2-201ENST00000457299 853 ntBASIC15.01□□□□□ -0.01
SNX18Q96RF0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 MPDU1-223ENST00000582151 728 ntBASIC15.01□□□□□ -0.01
SNX18Q96RF0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNX18Q96RF0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.01□□□□□ -0.01
SNX18Q96RF0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SNX18Q96RF0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15□□□□□ -0.01
SNX18Q96RF0 AC002310.6-201ENST00000624451 1377 ntBASIC15□□□□□ -0.01
SNX18Q96RF0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SNX18Q96RF0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SNX18Q96RF0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15□□□□□ -0.01
SNX18Q96RF0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SNX18Q96RF0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15□□□□□ -0.01
SNX18Q96RF0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15□□□□□ -0.01
SNX18Q96RF0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 MED22-202ENST00000371999 987 ntTSL 3 BASIC15□□□□□ -0.01
SNX18Q96RF0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15□□□□□ -0.01
SNX18Q96RF0 KRT18P67-201ENST00000432816 1264 ntBASIC15□□□□□ -0.01
SNX18Q96RF0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15□□□□□ -0.01
SNX18Q96RF0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15□□□□□ -0.01
SNX18Q96RF0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15□□□□□ -0.01
SNX18Q96RF0 AC006557.2-201ENST00000592985 1240 ntBASIC15□□□□□ -0.01
SNX18Q96RF0 SIGLEC29P-201ENST00000599873 1114 ntBASIC15□□□□□ -0.01
SNX18Q96RF0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15□□□□□ -0.01
SNX18Q96RF0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15□□□□□ -0.01
SNX18Q96RF0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SNX18Q96RF0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SNX18Q96RF0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNX18Q96RF0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 SNX33P1-201ENST00000592116 1762 ntBASIC14.99□□□□□ -0.01
SNX18Q96RF0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.99□□□□□ -0.01
SNX18Q96RF0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.99□□□□□ -0.01
SNX18Q96RF0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SNX18Q96RF0 GGT3P-204ENST00000453783 1664 ntBASIC14.99□□□□□ -0.01
SNX18Q96RF0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.99□□□□□ -0.01
SNX18Q96RF0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms