Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 LMOD3-203ENST00000489031 2221 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.04□□□□□ -0.64
PCP4P48539 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PCP4P48539 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PCP4P48539 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.04□□□□□ -0.64
PCP4P48539 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 PDE6B-201ENST00000255622 3280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 AC097359.2-201ENST00000604992 2389 ntBASIC11.03□□□□□ -0.64
PCP4P48539 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 OSBPL6-206ENST00000409045 3427 ntTSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 STK32C-205ENST00000456004 607 ntTSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 AGAP14-201ENST00000624701 2060 ntBASIC11.03□□□□□ -0.64
PCP4P48539 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
PCP4P48539 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PCP4P48539 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.03□□□□□ -0.64
PCP4P48539 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC11.03□□□□□ -0.64
PCP4P48539 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
PCP4P48539 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC11.02□□□□□ -0.64
PCP4P48539 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
PCP4P48539 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 AC092053.3-201ENST00000641308 4975 ntBASIC11.02□□□□□ -0.64
PCP4P48539 CCDC36-204ENST00000452691 2315 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
PCP4P48539 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PCP4P48539 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
PCP4P48539 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PCP4P48539 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
PCP4P48539 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC11.02□□□□□ -0.65
PCP4P48539 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC11.02□□□□□ -0.65
PCP4P48539 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PCP4P48539 MCU-204ENST00000536019 3224 ntTSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms