Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CHKAP35790 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHKAP35790 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.33■□□□□ 0.36
CHKAP35790 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHKAP35790 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHKAP35790 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.33■□□□□ 0.36
CHKAP35790 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.33■□□□□ 0.36
CHKAP35790 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.33■□□□□ 0.36
CHKAP35790 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.33■□□□□ 0.36
CHKAP35790 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 MTHFR-217ENST00000641820 1569 ntBASIC17.32■□□□□ 0.36
CHKAP35790 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.32■□□□□ 0.36
CHKAP35790 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.32■□□□□ 0.36
CHKAP35790 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.32■□□□□ 0.36
CHKAP35790 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.32■□□□□ 0.36
CHKAP35790 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.32■□□□□ 0.36
CHKAP35790 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHKAP35790 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 METTL21AP1-201ENST00000438852 635 ntBASIC17.32■□□□□ 0.36
CHKAP35790 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.32■□□□□ 0.36
CHKAP35790 TIMM8BP1-201ENST00000452384 211 ntBASIC17.32■□□□□ 0.36
CHKAP35790 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHKAP35790 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 AL031055.1-201ENST00000606362 631 ntBASIC17.32■□□□□ 0.36
CHKAP35790 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.32■□□□□ 0.36
CHKAP35790 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.32■□□□□ 0.36
CHKAP35790 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.32■□□□□ 0.36
CHKAP35790 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.32■□□□□ 0.36
CHKAP35790 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.32■□□□□ 0.36
CHKAP35790 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHKAP35790 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.32■□□□□ 0.36
CHKAP35790 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHKAP35790 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHKAP35790 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHKAP35790 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.31■□□□□ 0.36
CHKAP35790 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 MIR4492-201ENST00000581627 80 ntBASIC17.31■□□□□ 0.36
CHKAP35790 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.31■□□□□ 0.36
CHKAP35790 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.31■□□□□ 0.36
CHKAP35790 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
CHKAP35790 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHKAP35790 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHKAP35790 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms