Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATF1P18846 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ATF1P18846 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 AC069224.1-201ENST00000566372 1715 ntBASIC14.44□□□□□ -0.1
ATF1P18846 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ATF1P18846 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
ATF1P18846 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 FGFR3P6-201ENST00000457012 610 ntBASIC14.44□□□□□ -0.1
ATF1P18846 AC087163.2-201ENST00000457299 853 ntBASIC14.44□□□□□ -0.1
ATF1P18846 POU5F1P6-201ENST00000466990 990 ntBASIC14.44□□□□□ -0.1
ATF1P18846 KRT18P31-201ENST00000506277 1292 ntBASIC14.44□□□□□ -0.1
ATF1P18846 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 SART3-203ENST00000546611 1184 ntBASIC14.44□□□□□ -0.1
ATF1P18846 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.44□□□□□ -0.1
ATF1P18846 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 AC008608.2-201ENST00000606089 416 ntBASIC14.44□□□□□ -0.1
ATF1P18846 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.44□□□□□ -0.1
ATF1P18846 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.44□□□□□ -0.1
ATF1P18846 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATF1P18846 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.44□□□□□ -0.1
ATF1P18846 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ATF1P18846 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATF1P18846 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.43□□□□□ -0.1
ATF1P18846 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 AC016027.1-202ENST00000607927 1699 ntBASIC14.43□□□□□ -0.1
ATF1P18846 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 KRT8P39-201ENST00000396270 1433 ntBASIC14.43□□□□□ -0.1
ATF1P18846 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.43□□□□□ -0.1
ATF1P18846 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 PTCHD3P3-201ENST00000403073 906 ntBASIC14.43□□□□□ -0.1
ATF1P18846 UPK3BP1-201ENST00000428678 509 ntBASIC14.43□□□□□ -0.1
ATF1P18846 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.43□□□□□ -0.1
ATF1P18846 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 MIR4492-201ENST00000581627 80 ntBASIC14.43□□□□□ -0.1
ATF1P18846 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.43□□□□□ -0.1
ATF1P18846 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ATF1P18846 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
ATF1P18846 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATF1P18846 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms