Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.94■□□□□ 0.3
BRAFP15056 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.94■□□□□ 0.3
BRAFP15056 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.94■□□□□ 0.3
BRAFP15056 LINC00982-205ENST00000420957 435 ntBASIC16.94■□□□□ 0.3
BRAFP15056 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.94■□□□□ 0.3
BRAFP15056 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.94■□□□□ 0.3
BRAFP15056 AC106730.1-201ENST00000566722 1090 ntBASIC16.94■□□□□ 0.3
BRAFP15056 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
BRAFP15056 AL139424.1-201ENST00000607572 797 ntBASIC16.94■□□□□ 0.3
BRAFP15056 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
BRAFP15056 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
BRAFP15056 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.94■□□□□ 0.3
BRAFP15056 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
BRAFP15056 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRAFP15056 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.94■□□□□ 0.3
BRAFP15056 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
BRAFP15056 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BRAFP15056 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.93■□□□□ 0.3
BRAFP15056 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.93■□□□□ 0.3
BRAFP15056 AC136632.2-201ENST00000512891 861 ntBASIC16.93■□□□□ 0.3
BRAFP15056 RNA5SP415-201ENST00000517246 115 ntBASIC16.93■□□□□ 0.3
BRAFP15056 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 AC145285.3-201ENST00000564603 959 ntBASIC16.93■□□□□ 0.3
BRAFP15056 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 AL353135.1-201ENST00000606729 504 ntBASIC16.93■□□□□ 0.3
BRAFP15056 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.93■□□□□ 0.3
BRAFP15056 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.93■□□□□ 0.3
BRAFP15056 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BRAFP15056 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
BRAFP15056 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
BRAFP15056 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRAFP15056 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
BRAFP15056 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BRAFP15056 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
BRAFP15056 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.92■□□□□ 0.3
BRAFP15056 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.92■□□□□ 0.3
BRAFP15056 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.92■□□□□ 0.3
BRAFP15056 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.92■□□□□ 0.3
BRAFP15056 AC104109.2-201ENST00000602919 1418 ntBASIC16.92■□□□□ 0.3
BRAFP15056 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
BRAFP15056 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.92■□□□□ 0.3
BRAFP15056 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BRAFP15056 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BRAFP15056 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
BRAFP15056 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms