Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CPNE6O95741 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.12■□□□□ 0.17
CPNE6O95741 AC107890.1-201ENST00000422478 521 ntBASIC16.12■□□□□ 0.17
CPNE6O95741 AC055876.3-201ENST00000431496 288 ntBASIC16.12■□□□□ 0.17
CPNE6O95741 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.12■□□□□ 0.17
CPNE6O95741 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE6O95741 AC125807.1-201ENST00000483097 614 ntBASIC16.12■□□□□ 0.17
CPNE6O95741 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.12■□□□□ 0.17
CPNE6O95741 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.12■□□□□ 0.17
CPNE6O95741 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 AC138649.4-201ENST00000612222 287 ntBASIC16.12■□□□□ 0.17
CPNE6O95741 AJ011932.1-201ENST00000621707 465 ntBASIC16.12■□□□□ 0.17
CPNE6O95741 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
CPNE6O95741 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE6O95741 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE6O95741 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE6O95741 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE6O95741 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CPNE6O95741 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE6O95741 CROCCP1-201ENST00000426910 5675 ntBASIC16.12■□□□□ 0.17
CPNE6O95741 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.12■□□□□ 0.17
CPNE6O95741 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CPNE6O95741 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CPNE6O95741 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE6O95741 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE6O95741 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE6O95741 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.11■□□□□ 0.17
CPNE6O95741 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.11■□□□□ 0.17
CPNE6O95741 MIR943-201ENST00000401286 94 ntBASIC16.11■□□□□ 0.17
CPNE6O95741 BASP1P1-201ENST00000430708 665 ntBASIC16.11■□□□□ 0.17
CPNE6O95741 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.11■□□□□ 0.17
CPNE6O95741 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.11■□□□□ 0.17
CPNE6O95741 AC027307.2-201ENST00000591252 911 ntBASIC16.11■□□□□ 0.17
CPNE6O95741 AL390955.2-201ENST00000603032 514 ntBASIC16.11■□□□□ 0.17
CPNE6O95741 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.11■□□□□ 0.17
CPNE6O95741 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 AC078925.2-201ENST00000624013 1973 ntBASIC16.11■□□□□ 0.17
CPNE6O95741 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPNE6O95741 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.11■□□□□ 0.17
CPNE6O95741 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE6O95741 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE6O95741 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CPNE6O95741 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE6O95741 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CPNE6O95741 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE6O95741 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE6O95741 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.1■□□□□ 0.17
CPNE6O95741 SPDYE14P-201ENST00000442619 822 ntBASIC16.1■□□□□ 0.17
CPNE6O95741 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms