Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.9■□□□□ 0.3
TMCC1O94876 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.9■□□□□ 0.3
TMCC1O94876 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC1O94876 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMCC1O94876 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC1O94876 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC1O94876 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC1O94876 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC1O94876 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.9■□□□□ 0.3
TMCC1O94876 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC1O94876 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC1O94876 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.9■□□□□ 0.3
TMCC1O94876 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.89■□□□□ 0.3
TMCC1O94876 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.89■□□□□ 0.3
TMCC1O94876 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
TMCC1O94876 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMCC1O94876 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.89■□□□□ 0.3
TMCC1O94876 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMCC1O94876 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMCC1O94876 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TMCC1O94876 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 TFAMP1-201ENST00000412727 736 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 RPS8P6-201ENST00000426177 609 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.89■□□□□ 0.29
TMCC1O94876 AP006288.1-201ENST00000446065 395 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 TIMM8BP1-201ENST00000452384 211 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 FAM86C2P-203ENST00000528684 1004 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.89■□□□□ 0.29
TMCC1O94876 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 AC026120.1-201ENST00000611536 926 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.89■□□□□ 0.29
TMCC1O94876 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 AKAP8P1-201ENST00000434743 1349 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TMCC1O94876 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMCC1O94876 LINC02199-201ENST00000506655 2702 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TMCC1O94876 AL031731.1-201ENST00000642131 2094 ntBASIC16.89■□□□□ 0.29
TMCC1O94876 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC1O94876 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TMCC1O94876 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC1O94876 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC1O94876 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMCC1O94876 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TMCC1O94876 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.88■□□□□ 0.29
TMCC1O94876 RN7SL589P-201ENST00000481268 310 ntBASIC16.88■□□□□ 0.29
TMCC1O94876 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.88■□□□□ 0.29
TMCC1O94876 KRT8P48-201ENST00000515599 1220 ntBASIC16.88■□□□□ 0.29
TMCC1O94876 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.88■□□□□ 0.29
TMCC1O94876 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC1O94876 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.88■□□□□ 0.29
TMCC1O94876 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
TMCC1O94876 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.88■□□□□ 0.29
TMCC1O94876 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.88■□□□□ 0.29
TMCC1O94876 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TMCC1O94876 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC1O94876 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms