Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 ACTL9-202ENST00000612068 1252 ntBASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 KRT8P39-201ENST00000396270 1433 ntBASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AC012569.1-201ENST00000591191 1524 ntBASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 FAM45BP-202ENST00000592932 1624 ntBASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AC026396.1-201ENST00000419388 421 ntBASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AC023824.1-201ENST00000562945 2975 ntBASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AC104109.2-201ENST00000602919 1418 ntBASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DRB4X5D2U9 AL136379.1-201ENST00000623471 2642 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 IL9RP2-201ENST00000423948 1312 ntBASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DRB4X5D2U9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms