Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.53□□□□□ -0.08
DUX4Q9UBX2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 AL121912.1-201ENST00000603683 238 ntBASIC14.53□□□□□ -0.08
DUX4Q9UBX2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 LINC02228-204ENST00000642115 2962 ntBASIC14.53□□□□□ -0.08
DUX4Q9UBX2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
DUX4Q9UBX2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.52□□□□□ -0.08
DUX4Q9UBX2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 MYCLP1-201ENST00000372451 1075 ntBASIC14.52□□□□□ -0.09
DUX4Q9UBX2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 AC104692.2-201ENST00000603054 253 ntBASIC14.52□□□□□ -0.09
DUX4Q9UBX2 AC148477.8-201ENST00000624298 468 ntBASIC14.52□□□□□ -0.09
DUX4Q9UBX2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DUX4Q9UBX2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DUX4Q9UBX2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms