Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 TSSK5P-201ENST00000423978 907 ntBASIC19.05■□□□□ 0.64
SLF1Q9BQI6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 HLA-V-204ENST00000476601 1289 ntBASIC19.05■□□□□ 0.64
SLF1Q9BQI6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 LINC02560-201ENST00000596379 459 ntBASIC19.05■□□□□ 0.64
SLF1Q9BQI6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 AC008761.3-201ENST00000624803 892 ntBASIC19.05■□□□□ 0.64
SLF1Q9BQI6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SLF1Q9BQI6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 RNA5SP410-201ENST00000516285 106 ntBASIC19.04■□□□□ 0.64
SLF1Q9BQI6 AC190387.1-201ENST00000551683 408 ntBASIC19.04■□□□□ 0.64
SLF1Q9BQI6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLF1Q9BQI6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 FLJ38576-201ENST00000623820 2459 ntBASIC19.03■□□□□ 0.64
SLF1Q9BQI6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.03■□□□□ 0.64
SLF1Q9BQI6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms