Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 KRT8P13-201ENST00000463294 1010 ntBASIC22.31■■□□□ 1.16
XRN1Q8IZH2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
XRN1Q8IZH2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AC134312.5-201ENST00000568031 1313 ntBASIC22.3■■□□□ 1.16
XRN1Q8IZH2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AL592424.1-201ENST00000563624 1536 ntBASIC22.3■■□□□ 1.16
XRN1Q8IZH2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 LINC01144-201ENST00000626198 1710 ntBASIC22.3■■□□□ 1.16
XRN1Q8IZH2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 MIR326-201ENST00000362220 95 ntBASIC22.3■■□□□ 1.16
XRN1Q8IZH2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AC093433.1-201ENST00000458048 571 ntBASIC22.3■■□□□ 1.16
XRN1Q8IZH2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AP001063.1-201ENST00000568332 529 ntBASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AC009486.1-201ENST00000569860 813 ntBASIC22.3■■□□□ 1.16
XRN1Q8IZH2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.3■■□□□ 1.16
XRN1Q8IZH2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 BNIP3P1-202ENST00000550043 1585 ntBASIC22.29■■□□□ 1.16
XRN1Q8IZH2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 AC092506.1-202ENST00000401022 528 ntBASIC22.29■■□□□ 1.16
XRN1Q8IZH2 KRT18P43-201ENST00000469825 1281 ntBASIC22.29■■□□□ 1.16
XRN1Q8IZH2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 HLA-A-202ENST00000376806 1854 ntBASIC22.29■■□□□ 1.16
XRN1Q8IZH2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
XRN1Q8IZH2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 AC091804.1-201ENST00000486888 567 ntBASIC22.28■■□□□ 1.16
XRN1Q8IZH2 AC025279.2-201ENST00000569730 653 ntBASIC22.28■■□□□ 1.16
XRN1Q8IZH2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 AL118558.3-201ENST00000607414 1079 ntBASIC22.28■■□□□ 1.16
XRN1Q8IZH2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
XRN1Q8IZH2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
XRN1Q8IZH2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms