Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 EGFEM1P-202ENST00000431685 1563 ntBASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPRIN2Q6IMN6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 AC108751.1-201ENST00000490852 363 ntBASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 GGTLC5P-201ENST00000617623 998 ntBASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 AC104109.2-201ENST00000602919 1418 ntBASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPRIN2Q6IMN6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 AL365203.3-201ENST00000609742 2057 ntBASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 ZNF259P1-201ENST00000407656 1365 ntBASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPRIN2Q6IMN6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CAPRIN2Q6IMN6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPRIN2Q6IMN6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.73■□□□□ 0.27
CAPRIN2Q6IMN6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CAPRIN2Q6IMN6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPRIN2Q6IMN6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPRIN2Q6IMN6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPRIN2Q6IMN6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms