Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PRAME-210ENST00000442481 581 ntTSL 310.65□□□□□ -0.72e-8■□□□□ 8.3
NCBP2P52298 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.632e-11■□□□□ 8.2
NCBP2P52298 GOLGA3-204ENST00000534967 484 ntTSL 323.58■■□□□ 1.374e-7■□□□□ 8.2
NCBP2P52298 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.29■■□□□ 1.322e-11■□□□□ 8.2
NCBP2P52298 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.48■■□□□ 1.194e-7■□□□□ 8.2
NCBP2P52298 QKI-204ENST00000361758 6085 ntTSL 522.17■■□□□ 1.144e-7■□□□□ 8.2
NCBP2P52298 FZR1-206ENST00000588327 675 ntTSL 322.14■■□□□ 1.139e-9■□□□□ 8.2
NCBP2P52298 SLC25A36-206ENST00000502756 796 ntTSL 221.8■■□□□ 1.084e-7■□□□□ 8.2
NCBP2P52298 LSM4-202ENST00000593564 656 ntTSL 221.59■■□□□ 1.054e-7■□□□□ 8.2
NCBP2P52298 LSM4-204ENST00000594828 807 ntTSL 221.41■■□□□ 1.024e-7■□□□□ 8.2
NCBP2P52298 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.07■□□□□ 0.964e-7■□□□□ 8.2
NCBP2P52298 TM7SF2-217ENST00000530650 2094 ntTSL 1 (best)20.62■□□□□ 0.897e-14■□□□□ 8.2
NCBP2P52298 ABHD12-204ENST00000461204 712 ntTSL 320.49■□□□□ 0.872e-11■□□□□ 8.2
NCBP2P52298 TM7SF2-215ENST00000529414 749 ntTSL 319.81■□□□□ 0.767e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.767e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-216ENST00000529601 1671 ntTSL 219.52■□□□□ 0.727e-14■□□□□ 8.2
NCBP2P52298 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.24■□□□□ 0.674e-7■□□□□ 8.2
NCBP2P52298 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.09■□□□□ 0.654e-7■□□□□ 8.2
NCBP2P52298 TM7SF2-224ENST00000533766 1547 ntTSL 519■□□□□ 0.637e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-223ENST00000533646 486 ntTSL 218.66■□□□□ 0.587e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.567e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-214ENST00000529292 1305 ntTSL 518.36■□□□□ 0.537e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-221ENST00000531321 945 ntTSL 318.36■□□□□ 0.537e-14■□□□□ 8.2
NCBP2P52298 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.17■□□□□ 0.54e-7■□□□□ 8.2
NCBP2P52298 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.494e-7■□□□□ 8.2
NCBP2P52298 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.494e-7■□□□□ 8.2
NCBP2P52298 SLC25A36-202ENST00000393015 659 ntTSL 517.88■□□□□ 0.454e-7■□□□□ 8.2
NCBP2P52298 TM7SF2-205ENST00000525385 1014 ntTSL 517.88■□□□□ 0.457e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-211ENST00000528026 582 ntTSL 317.88■□□□□ 0.457e-14■□□□□ 8.2
NCBP2P52298 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.399e-9■□□□□ 8.2
NCBP2P52298 TM7SF2-208ENST00000526809 829 ntTSL 517.47■□□□□ 0.397e-14■□□□□ 8.2
NCBP2P52298 CBX2-203ENST00000571484 567 ntTSL 1 (best)17.41■□□□□ 0.389e-9■□□□□ 8.2
NCBP2P52298 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.374e-7■□□□□ 8.2
NCBP2P52298 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.369e-9■□□□□ 8.2
NCBP2P52298 TM7SF2-204ENST00000524986 729 ntTSL 317.19■□□□□ 0.347e-14■□□□□ 8.2
NCBP2P52298 TM7SF2-225ENST00000534371 913 ntTSL 517.19■□□□□ 0.347e-14■□□□□ 8.2
NCBP2P52298 MRPS16-204ENST00000473427 612 ntTSL 317.08■□□□□ 0.324e-7■□□□□ 8.2
NCBP2P52298 SHKBP1-224ENST00000600718 1993 ntTSL 516.66■□□□□ 0.264e-7■□□□□ 8.2
NCBP2P52298 SLC25A36-214ENST00000515813 738 ntTSL 216.61■□□□□ 0.254e-7■□□□□ 8.2
NCBP2P52298 SLC25A36-205ENST00000502594 1163 ntTSL 1 (best)16.06■□□□□ 0.164e-7■□□□□ 8.2
NCBP2P52298 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.44■□□□□ 0.064e-7■□□□□ 8.2
NCBP2P52298 SHKBP1-219ENST00000599575 810 ntTSL 515.41■□□□□ 0.064e-7■□□□□ 8.2
NCBP2P52298 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.034e-7■□□□□ 8.2
NCBP2P52298 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.18■□□□□ 0.029e-9■□□□□ 8.2
NCBP2P52298 LSM4-206ENST00000600289 1113 ntTSL 214.89□□□□□ -0.034e-7■□□□□ 8.2
NCBP2P52298 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.8□□□□□ -0.044e-7■□□□□ 8.2
NCBP2P52298 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.55□□□□□ -0.089e-9■□□□□ 8.2
NCBP2P52298 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.099e-9■□□□□ 8.2
NCBP2P52298 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.14e-7■□□□□ 8.2
NCBP2P52298 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.19□□□□□ -0.144e-7■□□□□ 8.2
NCBP2P52298 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.164e-7■□□□□ 8.2
NCBP2P52298 SHKBP1-211ENST00000595945 823 ntTSL 313.85□□□□□ -0.194e-7■□□□□ 8.2
NCBP2P52298 TM7SF2-207ENST00000526085 570 ntTSL 513.69□□□□□ -0.227e-14■□□□□ 8.2
NCBP2P52298 MRPS16-205ENST00000479005 2580 ntTSL 213.59□□□□□ -0.234e-7■□□□□ 8.2
NCBP2P52298 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.29□□□□□ -0.284e-7■□□□□ 8.2
NCBP2P52298 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.364e-7■□□□□ 8.2
NCBP2P52298 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.384e-7■□□□□ 8.2
NCBP2P52298 SHKBP1-209ENST00000595803 773 ntTSL 512.29□□□□□ -0.444e-7■□□□□ 8.2
NCBP2P52298 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.514e-7■□□□□ 8.2
NCBP2P52298 SMAD5-209ENST00000514777 588 ntTSL 311.56□□□□□ -0.564e-7■□□□□ 8.2
NCBP2P52298 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC11.31□□□□□ -0.64e-7■□□□□ 8.2
NCBP2P52298 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.664e-7■□□□□ 8.2
NCBP2P52298 BIRC2-204ENST00000527910 4073 ntTSL 1 (best)10.75□□□□□ -0.694e-7■□□□□ 8.2
NCBP2P52298 SHKBP1-220ENST00000599716 572 ntTSL 27.73□□□□□ -1.174e-7■□□□□ 8.2
NCBP2P52298 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.967e-7■□□□□ 8.2
NCBP2P52298 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.18■□□□□ 0.827e-7■□□□□ 8.2
NCBP2P52298 GDF15-203ENST00000595973 890 ntTSL 517.15■□□□□ 0.341e-8■□□□□ 8.2
NCBP2P52298 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.251e-8■□□□□ 8.2
NCBP2P52298 SPCS2-208ENST00000532972 839 ntTSL 216.55■□□□□ 0.241e-8■□□□□ 8.2
NCBP2P52298 UFL1-202ENST00000461673 458 ntTSL 216.41■□□□□ 0.227e-7■□□□□ 8.2
NCBP2P52298 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.34■□□□□ 0.217e-7■□□□□ 8.2
NCBP2P52298 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.27e-7■□□□□ 8.2
NCBP2P52298 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.177e-7■□□□□ 8.2
NCBP2P52298 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.79■□□□□ 0.121e-8■□□□□ 8.2
NCBP2P52298 AC008575.2-203ENST00000512790 1850 ntTSL 215.76■□□□□ 0.117e-7■□□□□ 8.2
NCBP2P52298 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.75■□□□□ 0.117e-7■□□□□ 8.2
NCBP2P52298 SPCS2-204ENST00000527225 321 ntTSL 515.64■□□□□ 0.091e-8■□□□□ 8.2
NCBP2P52298 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.31■□□□□ 0.041e-8■□□□□ 8.2
NCBP2P52298 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.041e-8■□□□□ 8.2
NCBP2P52298 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.81□□□□□ -0.047e-7■□□□□ 8.2
NCBP2P52298 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.057e-7■□□□□ 8.2
NCBP2P52298 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.077e-7■□□□□ 8.2
NCBP2P52298 KIZ-205ENST00000611685 1915 ntAPPRIS ALT2 TSL 214.56□□□□□ -0.081e-8■□□□□ 8.2
NCBP2P52298 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.27e-7■□□□□ 8.2
NCBP2P52298 SPCS2-205ENST00000527290 265 ntTSL 213.5□□□□□ -0.251e-8■□□□□ 8.2
NCBP2P52298 GDF15-204ENST00000597765 562 ntTSL 413.23□□□□□ -0.291e-8■□□□□ 8.2
NCBP2P52298 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.37e-7■□□□□ 8.2
NCBP2P52298 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.31e-8■□□□□ 8.2
NCBP2P52298 KIZ-215ENST00000622184 450 ntTSL 312.83□□□□□ -0.361e-8■□□□□ 8.2
NCBP2P52298 USP5-206ENST00000542087 438 ntTSL 312.76□□□□□ -0.377e-7■□□□□ 8.2
NCBP2P52298 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.377e-7■□□□□ 8.2
NCBP2P52298 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.381e-8■□□□□ 8.2
NCBP2P52298 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12.54□□□□□ -0.47e-7■□□□□ 8.2
NCBP2P52298 KIZ-206ENST00000612654 408 ntTSL 312.41□□□□□ -0.421e-8■□□□□ 8.2
NCBP2P52298 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC11.77□□□□□ -0.537e-7■□□□□ 8.2
NCBP2P52298 KIZ-212ENST00000620553 558 ntTSL 311.71□□□□□ -0.531e-8■□□□□ 8.2
NCBP2P52298 AC008575.2-201ENST00000503445 506 ntTSL 311.64□□□□□ -0.557e-7■□□□□ 8.2
NCBP2P52298 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.551e-8■□□□□ 8.2
NCBP2P52298 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.67e-7■□□□□ 8.2
NCBP2P52298 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.637e-7■□□□□ 8.2
Retrieved 100 of 18,329 protein–RNA pairs in 69.1 ms