Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.25■□□□□ 0.03
LCN1P31025 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.25■□□□□ 0.03
LCN1P31025 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 KRT18P34-201ENST00000488218 1270 ntBASIC15.25■□□□□ 0.03
LCN1P31025 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.25■□□□□ 0.03
LCN1P31025 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.25■□□□□ 0.03
LCN1P31025 AC002347.1-201ENST00000569543 541 ntBASIC15.25■□□□□ 0.03
LCN1P31025 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.25■□□□□ 0.03
LCN1P31025 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LCN1P31025 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
LCN1P31025 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LCN1P31025 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
LCN1P31025 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LCN1P31025 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.24■□□□□ 0.03
LCN1P31025 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.24■□□□□ 0.03
LCN1P31025 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
LCN1P31025 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.24■□□□□ 0.03
LCN1P31025 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LCN1P31025 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.24■□□□□ 0.03
LCN1P31025 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.24■□□□□ 0.03
LCN1P31025 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LCN1P31025 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 MIR574-201ENST00000385209 96 ntBASIC15.24■□□□□ 0.03
LCN1P31025 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.24■□□□□ 0.03
LCN1P31025 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 AP002472.1-201ENST00000577490 586 ntBASIC15.24■□□□□ 0.03
LCN1P31025 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.24■□□□□ 0.03
LCN1P31025 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LCN1P31025 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.24■□□□□ 0.03
LCN1P31025 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCN1P31025 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 AC068587.6-202ENST00000641839 5619 ntBASIC15.23■□□□□ 0.03
LCN1P31025 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LCN1P31025 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LCN1P31025 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.23■□□□□ 0.03
LCN1P31025 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LCN1P31025 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCN1P31025 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.23■□□□□ 0.03
LCN1P31025 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.23■□□□□ 0.03
LCN1P31025 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LCN1P31025 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.23■□□□□ 0.03
LCN1P31025 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms