Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.51■□□□□ 0.23
CTPS1P17812 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.51■□□□□ 0.23
CTPS1P17812 AP000842.3-202ENST00000569238 1080 ntBASIC16.51■□□□□ 0.23
CTPS1P17812 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.51■□□□□ 0.23
CTPS1P17812 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.51■□□□□ 0.23
CTPS1P17812 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
CTPS1P17812 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CTPS1P17812 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.51■□□□□ 0.23
CTPS1P17812 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.51■□□□□ 0.23
CTPS1P17812 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.5■□□□□ 0.23
CTPS1P17812 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.5■□□□□ 0.23
CTPS1P17812 AC093724.1-201ENST00000448659 1027 ntBASIC16.5■□□□□ 0.23
CTPS1P17812 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 AC105233.2-201ENST00000523697 349 ntBASIC16.5■□□□□ 0.23
CTPS1P17812 AF228730.5-201ENST00000530288 346 ntBASIC16.5■□□□□ 0.23
CTPS1P17812 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CTPS1P17812 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
CTPS1P17812 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.5■□□□□ 0.23
CTPS1P17812 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.5■□□□□ 0.23
CTPS1P17812 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.5■□□□□ 0.23
CTPS1P17812 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.5■□□□□ 0.23
CTPS1P17812 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CTPS1P17812 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CTPS1P17812 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTPS1P17812 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.5■□□□□ 0.23
CTPS1P17812 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.49■□□□□ 0.23
CTPS1P17812 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTPS1P17812 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CTPS1P17812 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.49■□□□□ 0.23
CTPS1P17812 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.49■□□□□ 0.23
CTPS1P17812 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.49■□□□□ 0.23
CTPS1P17812 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CTPS1P17812 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.49■□□□□ 0.23
CTPS1P17812 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.49■□□□□ 0.23
CTPS1P17812 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.49■□□□□ 0.23
CTPS1P17812 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CTPS1P17812 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.49■□□□□ 0.23
CTPS1P17812 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.49■□□□□ 0.23
CTPS1P17812 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTPS1P17812 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.49■□□□□ 0.23
CTPS1P17812 KRT8P23-201ENST00000560090 1207 ntBASIC16.49■□□□□ 0.23
CTPS1P17812 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTPS1P17812 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms