Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC130P13994 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC130P13994 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.37■□□□□ 0.37
CCDC130P13994 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC130P13994 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC130P13994 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC130P13994 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC130P13994 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC130P13994 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC130P13994 AL589702.1-201ENST00000641229 1509 ntBASIC17.37■□□□□ 0.37
CCDC130P13994 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CCDC130P13994 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 AP3S2-216ENST00000617003 1561 ntBASIC17.36■□□□□ 0.37
CCDC130P13994 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC130P13994 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC130P13994 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC130P13994 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC130P13994 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 Z92544.3-201ENST00000624747 417 ntBASIC17.36■□□□□ 0.37
CCDC130P13994 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC130P13994 PCDH8P1-201ENST00000428983 2773 ntBASIC17.36■□□□□ 0.37
CCDC130P13994 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC130P13994 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC130P13994 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 AC098859.1-201ENST00000502915 1238 ntBASIC17.35■□□□□ 0.37
CCDC130P13994 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 RARRES2P9-201ENST00000565168 469 ntBASIC17.35■□□□□ 0.37
CCDC130P13994 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 AP001059.3-201ENST00000619053 235 ntBASIC17.35■□□□□ 0.37
CCDC130P13994 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC130P13994 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC130P13994 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC130P13994 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC130P13994 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms