Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC027612.1-201ENST00000445234 2395 ntBASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 C1R-201ENST00000535233 2211 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 ENSA-205ENST00000361532 792 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 RPP21-222ENST00000433076 577 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 AC009299.2-201ENST00000482477 511 ntBASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 AC006486.2-201ENST00000624246 2199 ntBASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CHKB-CPT1BH3BT56 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC9.09□□□□□ -0.96
CHKB-CPT1BH3BT56 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
CHKB-CPT1BH3BT56 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.96
CHKB-CPT1BH3BT56 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 AMT-206ENST00000458307 1860 ntTSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 POLL-217ENST00000628479 1953 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 LINC00552-201ENST00000625151 2579 ntBASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 KIRREL3-AS3-201ENST00000404882 831 ntBASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 RARRES2P4-201ENST00000514074 484 ntBASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 GALNS-213ENST00000569433 723 ntTSL 3 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 ABR-228ENST00000574437 3196 ntTSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CHKB-CPT1BH3BT56 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms