Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC187A0A096LP49 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AL391256.1-201ENST00000443260 1855 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 PCDHB17P-201ENST00000539533 2393 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 RPS2P32-201ENST00000439199 892 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 RN7SL837P-201ENST00000463010 287 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AC123567.1-201ENST00000548294 1261 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 MIR6799-201ENST00000620297 69 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AL109936.8-201ENST00000641772 604 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 AC092068.3-201ENST00000587894 2016 ntBASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC187A0A096LP49 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 MIR658-201ENST00000385210 100 ntBASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AC023310.3-201ENST00000557027 670 ntBASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AC100756.1-201ENST00000562736 682 ntBASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AC138749.3-201ENST00000567691 622 ntBASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AC093726.1-201ENST00000608064 963 ntBASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 AC116165.1-201ENST00000611806 668 ntBASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 PP12613-201ENST00000424958 2230 ntBASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCDC187A0A096LP49 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 AL512652.2-201ENST00000625156 1716 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms