Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 SLC22A20-204ENST00000530038 1673 ntBASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.45□□□□□ -0.42
HLA-DRB4X5D2U9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 AC132872.4-202ENST00000622924 2756 ntBASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 FAM185BP-201ENST00000443595 716 ntBASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 FDX1P1-201ENST00000449115 551 ntBASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 CYP2A7P1-201ENST00000595391 815 ntBASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HLA-DRB4X5D2U9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-DRB4X5D2U9 AC145285.3-201ENST00000564603 959 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms