Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 AC069120.2-201ENST00000524091 540 ntBASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 AC190387.1-201ENST00000551683 408 ntBASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 CYP2A7P1-201ENST00000595391 815 ntBASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 AL158211.3-201ENST00000607385 239 ntBASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.58■□□□□ 0.56
HDAC6Q9UBN7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 AC011270.2-201ENST00000624293 2550 ntBASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 AC015922.1-201ENST00000421102 1152 ntBASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 MIR4492-201ENST00000581627 80 ntBASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 MIR4453-201ENST00000584019 89 ntBASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HDAC6Q9UBN7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AL021920.2-201ENST00000624828 1351 ntBASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms