Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 AC004870.1-201ENST00000315132 882 ntBASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 IGHGP-201ENST00000390555 1178 ntBASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 AC012615.1-201ENST00000565797 1299 ntBASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 AL390719.2-201ENST00000606993 987 ntBASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 AC078925.2-201ENST00000624013 1973 ntBASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.81□□□□□ -0.36
NDUFAF3Q9BU61 OR2I1P-210ENST00000642037 4691 ntBASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC016396.2-201ENST00000562575 1417 ntBASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 RNF216P1-203ENST00000404404 2427 ntBASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC007326.2-201ENST00000624224 7579 ntBASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms