Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.43□□□□□ -0.1
C11orf88Q6PI97 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 AC004263.2-201ENST00000617183 678 ntBASIC14.43□□□□□ -0.1
C11orf88Q6PI97 AC009154.2-201ENST00000621177 724 ntBASIC14.43□□□□□ -0.1
C11orf88Q6PI97 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 AC099063.4-201ENST00000641099 1602 ntBASIC14.43□□□□□ -0.1
C11orf88Q6PI97 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
C11orf88Q6PI97 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 IFNL4P1-201ENST00000607083 540 ntBASIC14.42□□□□□ -0.1
C11orf88Q6PI97 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C11orf88Q6PI97 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms