Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
UBE2D3P61077 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D3P61077 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.76□□□□□ -0.53
UBE2D3P61077 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UBE2D3P61077 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 AC138035.3-201ENST00000622706 2791 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D3P61077 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 MIR1224-201ENST00000408193 85 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.76□□□□□ -0.53
UBE2D3P61077 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
UBE2D3P61077 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.76□□□□□ -0.53
UBE2D3P61077 PRELID1P1-202ENST00000567272 903 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
UBE2D3P61077 AC006557.2-201ENST00000592985 1240 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.76□□□□□ -0.53
UBE2D3P61077 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 LINC01711-201ENST00000598340 967 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 AC022532.1-201ENST00000624563 1728 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D3P61077 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 KRT8P39-201ENST00000396270 1433 ntBASIC11.76□□□□□ -0.53
UBE2D3P61077 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.76□□□□□ -0.53
UBE2D3P61077 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UBE2D3P61077 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBE2D3P61077 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 AL671710.1-201ENST00000610245 2349 ntBASIC11.75□□□□□ -0.53
UBE2D3P61077 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D3P61077 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D3P61077 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 LAGE3P1-201ENST00000425356 484 ntBASIC11.75□□□□□ -0.53
UBE2D3P61077 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 SAPCD2P3-201ENST00000455031 850 ntBASIC11.75□□□□□ -0.53
UBE2D3P61077 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D3P61077 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D3P61077 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D3P61077 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.75□□□□□ -0.53
UBE2D3P61077 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms