Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.67■□□□□ 0.1
NR1H2P55055 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H2P55055 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H2P55055 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 AL645728.1-201ENST00000366221 2101 ntBASIC15.67■□□□□ 0.1
NR1H2P55055 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.67■□□□□ 0.1
NR1H2P55055 AC096582.2-201ENST00000510860 516 ntBASIC15.67■□□□□ 0.1
NR1H2P55055 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.67■□□□□ 0.1
NR1H2P55055 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.67■□□□□ 0.1
NR1H2P55055 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.67■□□□□ 0.1
NR1H2P55055 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H2P55055 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NR1H2P55055 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.67■□□□□ 0.1
NR1H2P55055 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NR1H2P55055 CICP4-201ENST00000447359 2812 ntBASIC15.67■□□□□ 0.1
NR1H2P55055 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NR1H2P55055 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NR1H2P55055 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H2P55055 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.66■□□□□ 0.1
NR1H2P55055 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H2P55055 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.66■□□□□ 0.1
NR1H2P55055 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NR1H2P55055 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H2P55055 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H2P55055 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR1H2P55055 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.66■□□□□ 0.1
NR1H2P55055 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NR1H2P55055 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NR1H2P55055 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NR1H2P55055 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.65■□□□□ 0.1
NR1H2P55055 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.65■□□□□ 0.1
NR1H2P55055 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.65■□□□□ 0.1
NR1H2P55055 AC091607.1-201ENST00000490318 1060 ntBASIC15.65■□□□□ 0.1
NR1H2P55055 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 BNIP3P18-201ENST00000593976 575 ntBASIC15.65■□□□□ 0.1
NR1H2P55055 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.65■□□□□ 0.1
NR1H2P55055 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms