Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.56■□□□□ 0.24
LSP1P33241 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 FAM220CP-201ENST00000395253 831 ntBASIC16.56■□□□□ 0.24
LSP1P33241 KLF4P1-201ENST00000412782 1185 ntBASIC16.56■□□□□ 0.24
LSP1P33241 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.56■□□□□ 0.24
LSP1P33241 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.56■□□□□ 0.24
LSP1P33241 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.56■□□□□ 0.24
LSP1P33241 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.56■□□□□ 0.24
LSP1P33241 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 AL390755.1-201ENST00000623716 2027 ntBASIC16.56■□□□□ 0.24
LSP1P33241 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.56■□□□□ 0.24
LSP1P33241 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSP1P33241 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LSP1P33241 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LSP1P33241 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LSP1P33241 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LSP1P33241 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 MIR1238-201ENST00000408483 83 ntBASIC16.55■□□□□ 0.24
LSP1P33241 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.55■□□□□ 0.24
LSP1P33241 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 AC128688.1-201ENST00000487626 519 ntBASIC16.55■□□□□ 0.24
LSP1P33241 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LSP1P33241 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
LSP1P33241 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.55■□□□□ 0.24
LSP1P33241 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.55■□□□□ 0.24
LSP1P33241 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LSP1P33241 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.54■□□□□ 0.24
LSP1P33241 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 KRT8P39-201ENST00000396270 1433 ntBASIC16.54■□□□□ 0.24
LSP1P33241 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LSP1P33241 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
LSP1P33241 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LSP1P33241 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms