Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
COL5A2P05997 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.25■□□□□ 0.99
COL5A2P05997 BAATP1-201ENST00000412284 1225 ntBASIC21.25■□□□□ 0.99
COL5A2P05997 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.25■□□□□ 0.99
COL5A2P05997 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.25■□□□□ 0.99
COL5A2P05997 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
COL5A2P05997 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC21.25■□□□□ 0.99
COL5A2P05997 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.25■□□□□ 0.99
COL5A2P05997 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.25■□□□□ 0.99
COL5A2P05997 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
COL5A2P05997 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
COL5A2P05997 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL5A2P05997 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.24■□□□□ 0.99
COL5A2P05997 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 LINC01144-201ENST00000626198 1710 ntBASIC21.24■□□□□ 0.99
COL5A2P05997 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
COL5A2P05997 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 C1QBPP1-201ENST00000400117 770 ntBASIC21.24■□□□□ 0.99
COL5A2P05997 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.24■□□□□ 0.99
COL5A2P05997 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.24■□□□□ 0.99
COL5A2P05997 AC006033.1-201ENST00000440505 426 ntBASIC21.24■□□□□ 0.99
COL5A2P05997 VDAC1P7-201ENST00000462417 847 ntBASIC21.24■□□□□ 0.99
COL5A2P05997 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.24■□□□□ 0.99
COL5A2P05997 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.24■□□□□ 0.99
COL5A2P05997 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21.24■□□□□ 0.99
COL5A2P05997 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.24■□□□□ 0.99
COL5A2P05997 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
COL5A2P05997 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.24■□□□□ 0.99
COL5A2P05997 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL5A2P05997 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.23■□□□□ 0.99
COL5A2P05997 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL5A2P05997 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
COL5A2P05997 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL5A2P05997 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.23■□□□□ 0.99
COL5A2P05997 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL5A2P05997 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
COL5A2P05997 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.23■□□□□ 0.99
COL5A2P05997 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.23■□□□□ 0.99
COL5A2P05997 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
COL5A2P05997 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.23■□□□□ 0.99
COL5A2P05997 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL5A2P05997 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL5A2P05997 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL5A2P05997 RN7SL560P-201ENST00000577943 264 ntBASIC21.23■□□□□ 0.99
COL5A2P05997 RHOXF1P1-202ENST00000635473 501 ntBASIC21.23■□□□□ 0.99
COL5A2P05997 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL5A2P05997 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL5A2P05997 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.23■□□□□ 0.99
COL5A2P05997 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.23■□□□□ 0.99
COL5A2P05997 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.22■□□□□ 0.99
COL5A2P05997 LETM1P2-201ENST00000597330 2178 ntBASIC21.22■□□□□ 0.99
COL5A2P05997 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.22■□□□□ 0.99
COL5A2P05997 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 RPL13AP25-201ENST00000484130 612 ntBASIC21.22■□□□□ 0.99
COL5A2P05997 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.22■□□□□ 0.99
COL5A2P05997 SLED1-202ENST00000512051 380 ntBASIC21.22■□□□□ 0.99
COL5A2P05997 AC079316.1-201ENST00000548397 411 ntBASIC21.22■□□□□ 0.99
COL5A2P05997 RHOQP1-201ENST00000555758 579 ntBASIC21.22■□□□□ 0.99
COL5A2P05997 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC21.22■□□□□ 0.99
COL5A2P05997 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL5A2P05997 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.22■□□□□ 0.99
COL5A2P05997 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.22■□□□□ 0.99
COL5A2P05997 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.22■□□□□ 0.99
COL5A2P05997 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL5A2P05997 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL5A2P05997 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL5A2P05997 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.21■□□□□ 0.99
COL5A2P05997 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL5A2P05997 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL5A2P05997 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms