Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC01558Q9Y6Z2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01558Q9Y6Z2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01558Q9Y6Z2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01558Q9Y6Z2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC12.46□□□□□ -0.41
LINC01558Q9Y6Z2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01558Q9Y6Z2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LINC01558Q9Y6Z2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01558Q9Y6Z2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01558Q9Y6Z2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01558Q9Y6Z2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01558Q9Y6Z2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 AC233723.2-201ENST00000623798 2106 ntBASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01558Q9Y6Z2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01558Q9Y6Z2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 AC100797.4-201ENST00000631653 1827 ntBASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LINC01558Q9Y6Z2 EED-207ENST00000528180 1745 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 WWC2-AS2-201ENST00000578387 2183 ntBASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01558Q9Y6Z2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LINC01558Q9Y6Z2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC01558Q9Y6Z2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC01558Q9Y6Z2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC01558Q9Y6Z2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC01558Q9Y6Z2 FOXO3B-201ENST00000395675 1928 ntBASIC12.41□□□□□ -0.42
LINC01558Q9Y6Z2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01558Q9Y6Z2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01558Q9Y6Z2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 LINC00526-201ENST00000581067 1875 ntBASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LINC01558Q9Y6Z2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01558Q9Y6Z2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms