Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD4Q9H0A8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD4Q9H0A8 SLC6A10P-202ENST00000431994 2058 ntBASIC20.84■□□□□ 0.93
COMMD4Q9H0A8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.84■□□□□ 0.93
COMMD4Q9H0A8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COMMD4Q9H0A8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.84■□□□□ 0.93
COMMD4Q9H0A8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
COMMD4Q9H0A8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COMMD4Q9H0A8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COMMD4Q9H0A8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COMMD4Q9H0A8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
COMMD4Q9H0A8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.83■□□□□ 0.92
COMMD4Q9H0A8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.82■□□□□ 0.92
COMMD4Q9H0A8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.82■□□□□ 0.92
COMMD4Q9H0A8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COMMD4Q9H0A8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
COMMD4Q9H0A8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 ABHD17AP4-201ENST00000411545 909 ntBASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COMMD4Q9H0A8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD4Q9H0A8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD4Q9H0A8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 LINC00543-201ENST00000567234 1845 ntBASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.78■□□□□ 0.92
COMMD4Q9H0A8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD4Q9H0A8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 AC141586.4-201ENST00000624558 1573 ntBASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 CR559946.2-201ENST00000623684 991 ntBASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD4Q9H0A8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.75■□□□□ 0.91
COMMD4Q9H0A8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD4Q9H0A8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD4Q9H0A8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.74■□□□□ 0.91
COMMD4Q9H0A8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD4Q9H0A8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.73■□□□□ 0.91
COMMD4Q9H0A8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.73■□□□□ 0.91
COMMD4Q9H0A8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
COMMD4Q9H0A8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.73■□□□□ 0.91
COMMD4Q9H0A8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD4Q9H0A8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD4Q9H0A8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD4Q9H0A8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms