Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 AC004812.2-201ENST00000611079 2094 ntBASIC20.41■□□□□ 0.86
CMTM3Q96MX0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CMTM3Q96MX0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CMTM3Q96MX0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CMTM3Q96MX0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CMTM3Q96MX0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CMTM3Q96MX0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CMTM3Q96MX0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CMTM3Q96MX0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CMTM3Q96MX0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CMTM3Q96MX0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CMTM3Q96MX0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CMTM3Q96MX0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CMTM3Q96MX0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CMTM3Q96MX0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CMTM3Q96MX0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CMTM3Q96MX0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CMTM3Q96MX0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.38■□□□□ 0.85
CMTM3Q96MX0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.38■□□□□ 0.85
CMTM3Q96MX0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CMTM3Q96MX0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CMTM3Q96MX0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CMTM3Q96MX0 AL359504.2-201ENST00000605506 1601 ntBASIC20.37■□□□□ 0.85
CMTM3Q96MX0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CMTM3Q96MX0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CMTM3Q96MX0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CMTM3Q96MX0 CLDN5-201ENST00000403084 2357 ntBASIC20.35■□□□□ 0.85
CMTM3Q96MX0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CMTM3Q96MX0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CMTM3Q96MX0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.34■□□□□ 0.85
CMTM3Q96MX0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CMTM3Q96MX0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CMTM3Q96MX0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CMTM3Q96MX0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CMTM3Q96MX0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CMTM3Q96MX0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.33■□□□□ 0.85
CMTM3Q96MX0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CMTM3Q96MX0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.33■□□□□ 0.85
CMTM3Q96MX0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.33■□□□□ 0.85
CMTM3Q96MX0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.33■□□□□ 0.85
CMTM3Q96MX0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CMTM3Q96MX0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CMTM3Q96MX0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CMTM3Q96MX0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CMTM3Q96MX0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CMTM3Q96MX0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.32■□□□□ 0.84
CMTM3Q96MX0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
CMTM3Q96MX0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.32■□□□□ 0.84
CMTM3Q96MX0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CMTM3Q96MX0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CMTM3Q96MX0 MIR6089-201ENST00000616698 64 ntBASIC20.32■□□□□ 0.84
CMTM3Q96MX0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CMTM3Q96MX0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.32■□□□□ 0.84
CMTM3Q96MX0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CMTM3Q96MX0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
CMTM3Q96MX0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
CMTM3Q96MX0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.29■□□□□ 0.84
CMTM3Q96MX0 AL117328.2-201ENST00000624617 1940 ntBASIC20.29■□□□□ 0.84
CMTM3Q96MX0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CMTM3Q96MX0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CMTM3Q96MX0 AC008813.1-201ENST00000536597 885 ntBASIC20.28■□□□□ 0.84
CMTM3Q96MX0 AC148477.6-201ENST00000623746 465 ntBASIC20.28■□□□□ 0.84
CMTM3Q96MX0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CMTM3Q96MX0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms