Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC011551.1-201ENST00000614101 683 ntBASIC28.34■■■□□ 2.13
CDCA5Q96FF9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.33■■■□□ 2.13
CDCA5Q96FF9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDCA5Q96FF9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.33■■■□□ 2.13
CDCA5Q96FF9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.33■■■□□ 2.13
CDCA5Q96FF9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.33■■■□□ 2.13
CDCA5Q96FF9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDCA5Q96FF9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
CDCA5Q96FF9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDCA5Q96FF9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CDCA5Q96FF9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDCA5Q96FF9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDCA5Q96FF9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDCA5Q96FF9 AC106739.1-201ENST00000617035 715 ntBASIC28.32■■■□□ 2.12
CDCA5Q96FF9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
CDCA5Q96FF9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDCA5Q96FF9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.31■■■□□ 2.12
CDCA5Q96FF9 PBX2P1-201ENST00000493219 1291 ntBASIC28.31■■■□□ 2.12
CDCA5Q96FF9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.31■■■□□ 2.12
CDCA5Q96FF9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.31■■■□□ 2.12
CDCA5Q96FF9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
CDCA5Q96FF9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CDCA5Q96FF9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
CDCA5Q96FF9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDCA5Q96FF9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDCA5Q96FF9 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.3■■■□□ 2.12
CDCA5Q96FF9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CDCA5Q96FF9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDCA5Q96FF9 ABCB10P1-201ENST00000614297 2181 ntBASIC28.29■■■□□ 2.12
CDCA5Q96FF9 AC026271.2-201ENST00000428091 497 ntBASIC28.29■■■□□ 2.12
CDCA5Q96FF9 AC142381.2-201ENST00000566120 298 ntBASIC28.29■■■□□ 2.12
CDCA5Q96FF9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDCA5Q96FF9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
CDCA5Q96FF9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.12
CDCA5Q96FF9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.26■■■□□ 2.11
CDCA5Q96FF9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.26■■■□□ 2.11
CDCA5Q96FF9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDCA5Q96FF9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDCA5Q96FF9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDCA5Q96FF9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.25■■■□□ 2.11
CDCA5Q96FF9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDCA5Q96FF9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDCA5Q96FF9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDCA5Q96FF9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.23■■■□□ 2.11
CDCA5Q96FF9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDCA5Q96FF9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDCA5Q96FF9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
CDCA5Q96FF9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDCA5Q96FF9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.22■■■□□ 2.11
CDCA5Q96FF9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CDCA5Q96FF9 AC135279.3-201ENST00000610945 1311 ntBASIC28.21■■■□□ 2.11
CDCA5Q96FF9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.21■■■□□ 2.11
CDCA5Q96FF9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CDCA5Q96FF9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.21■■■□□ 2.11
CDCA5Q96FF9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.21■■■□□ 2.11
CDCA5Q96FF9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.21■■■□□ 2.11
CDCA5Q96FF9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CDCA5Q96FF9 AL031432.3-201ENST00000607698 485 ntBASIC28.21■■■□□ 2.11
CDCA5Q96FF9 AC142472.1-201ENST00000612013 1741 ntBASIC28.21■■■□□ 2.11
CDCA5Q96FF9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CDCA5Q96FF9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDCA5Q96FF9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.2■■■□□ 2.1
CDCA5Q96FF9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.2■■■□□ 2.1
CDCA5Q96FF9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.2■■■□□ 2.1
CDCA5Q96FF9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.2■■■□□ 2.1
CDCA5Q96FF9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDCA5Q96FF9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CDCA5Q96FF9 AF131216.4-201ENST00000638924 1588 ntBASIC28.2■■■□□ 2.1
CDCA5Q96FF9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDCA5Q96FF9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDCA5Q96FF9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDCA5Q96FF9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CDCA5Q96FF9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.19■■■□□ 2.1
CDCA5Q96FF9 SUDS3P1-201ENST00000505831 966 ntBASIC28.19■■■□□ 2.1
CDCA5Q96FF9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.19■■■□□ 2.1
CDCA5Q96FF9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CDCA5Q96FF9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.18■■■□□ 2.1
CDCA5Q96FF9 UNC93B3-201ENST00000308076 687 ntBASIC28.18■■■□□ 2.1
CDCA5Q96FF9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDCA5Q96FF9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.18■■■□□ 2.1
CDCA5Q96FF9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CDCA5Q96FF9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.18■■■□□ 2.1
CDCA5Q96FF9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.17■■■□□ 2.1
CDCA5Q96FF9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
CDCA5Q96FF9 AC104564.3-201ENST00000582367 638 ntBASIC28.17■■■□□ 2.1
CDCA5Q96FF9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.17■■■□□ 2.1
CDCA5Q96FF9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDCA5Q96FF9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CDCA5Q96FF9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.16■■■□□ 2.1
CDCA5Q96FF9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CDCA5Q96FF9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.16■■■□□ 2.1
CDCA5Q96FF9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms