Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 AC135279.3-201ENST00000610945 1311 ntBASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 AL031432.3-201ENST00000607698 485 ntBASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 BX255925.1-201ENST00000566954 1854 ntBASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 AC104564.3-201ENST00000582367 638 ntBASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 AC011551.1-201ENST00000614101 683 ntBASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 SUDS3P1-201ENST00000505831 966 ntBASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 UNC93B3-201ENST00000308076 687 ntBASIC26.21■■□□□ 1.79
TRIM43Q96BQ3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
TRIM43Q96BQ3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM43Q96BQ3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 MIR5787-201ENST00000611784 55 ntBASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.17■■□□□ 1.78
TRIM43Q96BQ3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 AF131216.4-201ENST00000638924 1588 ntBASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 AL136162.1-201ENST00000607711 1078 ntBASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM43Q96BQ3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM43Q96BQ3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms