Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM43Q96BQ3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 AC135279.3-201ENST00000610945 1311 ntBASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM43Q96BQ3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM43Q96BQ3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 AL031432.3-201ENST00000607698 485 ntBASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
TRIM43Q96BQ3 BX255925.1-201ENST00000566954 1854 ntBASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
TRIM43Q96BQ3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 AC104564.3-201ENST00000582367 638 ntBASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 AC011551.1-201ENST00000614101 683 ntBASIC26.24■■□□□ 1.79
TRIM43Q96BQ3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 SUDS3P1-201ENST00000505831 966 ntBASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM43Q96BQ3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM43Q96BQ3 UNC93B3-201ENST00000308076 687 ntBASIC26.21■■□□□ 1.79
TRIM43Q96BQ3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
TRIM43Q96BQ3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.21■■□□□ 1.79
TRIM43Q96BQ3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 MIR5787-201ENST00000611784 55 ntBASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM43Q96BQ3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TRIM43Q96BQ3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM43Q96BQ3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.17■■□□□ 1.78
TRIM43Q96BQ3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 AF131216.4-201ENST00000638924 1588 ntBASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
TRIM43Q96BQ3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 AL136162.1-201ENST00000607711 1078 ntBASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM43Q96BQ3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM43Q96BQ3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM43Q96BQ3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TRIM43Q96BQ3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM43Q96BQ3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.12■■□□□ 1.77
TRIM43Q96BQ3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms