Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
LNX1Q8TBB1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
LNX1Q8TBB1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LNX1Q8TBB1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LNX1Q8TBB1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LNX1Q8TBB1 AC087393.1-201ENST00000582896 145 ntBASIC25.9■■□□□ 1.74
LNX1Q8TBB1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LNX1Q8TBB1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LNX1Q8TBB1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LNX1Q8TBB1 AC096887.2-201ENST00000623443 1957 ntBASIC25.89■■□□□ 1.74
LNX1Q8TBB1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
LNX1Q8TBB1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
LNX1Q8TBB1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.89■■□□□ 1.74
LNX1Q8TBB1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.89■■□□□ 1.74
LNX1Q8TBB1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
LNX1Q8TBB1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.89■■□□□ 1.73
LNX1Q8TBB1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
LNX1Q8TBB1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LNX1Q8TBB1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LNX1Q8TBB1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.87■■□□□ 1.73
LNX1Q8TBB1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LNX1Q8TBB1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LNX1Q8TBB1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LNX1Q8TBB1 AC009299.2-201ENST00000482477 511 ntBASIC25.86■■□□□ 1.73
LNX1Q8TBB1 AC019171.1-201ENST00000601251 1056 ntBASIC25.86■■□□□ 1.73
LNX1Q8TBB1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LNX1Q8TBB1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
LNX1Q8TBB1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 RPS2P7-201ENST00000447334 885 ntBASIC25.85■■□□□ 1.73
LNX1Q8TBB1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
LNX1Q8TBB1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LNX1Q8TBB1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LNX1Q8TBB1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LNX1Q8TBB1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LNX1Q8TBB1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LNX1Q8TBB1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LNX1Q8TBB1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.84■■□□□ 1.73
LNX1Q8TBB1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
LNX1Q8TBB1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LNX1Q8TBB1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LNX1Q8TBB1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LNX1Q8TBB1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.72
LNX1Q8TBB1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 AC103724.3-201ENST00000564481 992 ntBASIC25.82■■□□□ 1.72
LNX1Q8TBB1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
LNX1Q8TBB1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
LNX1Q8TBB1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.81■■□□□ 1.72
LNX1Q8TBB1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LNX1Q8TBB1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LNX1Q8TBB1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LNX1Q8TBB1 LONRF2P2-201ENST00000439212 571 ntBASIC25.8■■□□□ 1.72
LNX1Q8TBB1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LNX1Q8TBB1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LNX1Q8TBB1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
LNX1Q8TBB1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LNX1Q8TBB1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
LNX1Q8TBB1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LNX1Q8TBB1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LNX1Q8TBB1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
LNX1Q8TBB1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.79■■□□□ 1.72
LNX1Q8TBB1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
LNX1Q8TBB1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
LNX1Q8TBB1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LNX1Q8TBB1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.77■■□□□ 1.72
LNX1Q8TBB1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
LNX1Q8TBB1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LNX1Q8TBB1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LNX1Q8TBB1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.77■■□□□ 1.72
LNX1Q8TBB1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms